Molecules, absorption and how we found out
Each day the digestive tract handles up to 10 litres of food, drink and juices, yet less than one litre reaches the large intestine.
Big molecules into small ones
A slice of bread, an egg and a pat of butter look nothing alike, but digestion treats them the same way: it cuts large molecules into small building blocks that can cross the wall of the gut. The NIDDK lists three main conversions. Carbohydrates are broken into simple sugars. Proteins are broken into amino acids. Fats are broken into fatty acids and glycerol.
Each food group starts its breakdown in a different place but finishes in the same one. Starch digestion begins in the mouth with salivary amylase and continues in the small intestine with pancreatic amylase. Protein digestion begins in the stomach with pepsin and continues in the small intestine with trypsin and other pancreatic enzymes. Fat digestion barely starts in the stomach with lingual lipase; most of it happens in the small intestine, where bile emulsifies fat and pancreatic lipase splits it. The final steps for carbohydrates and proteins happen right at the brush border, where enzymes are fixed to the membranes of the microvilli.
| Food | Main enzymes | Absorbed as |
|---|---|---|
| Starch (begins in the mouth) | Salivary and pancreatic amylase, brush border enzymes | Simple sugars |
| Protein (begins in the stomach) | Pepsin, trypsin and other pancreatic enzymes, brush border enzymes | Amino acids |
| Fat (mostly in the small intestine) | Lingual and pancreatic lipase, helped by bile | Fatty acids and glycerol |
Two roads out of the gut
Absorbed nutrients take two routes. Simple sugars and amino acids, along with glycerol, some vitamins and salts, pass into the blood capillaries of the villi and travel to the liver through the hepatic portal system. The liver stores, processes and sends them on when needed. Fatty acids and fat-soluble vitamins go into the lacteals instead and travel in the lymph before they join the blood. OpenStax gives some numbers for how complete this is. Almost all protein, 95 to 98 percent, is digested and absorbed in the small intestine, along with about 95 percent of lipids, and the small intestine can absorb simple sugars at an estimated 120 grams per hour.
How we found out
Much of this was worked out through careful experiments over two centuries. You met William Beaumont in the lesson on the stomach. His book of 1833 described 238 experiments on Alexis St. Martin's stomach and settled the question of whether digestion in the stomach is chemical. Later in the century the Russian physiologist Ivan Pavlov studied the nerves that control digestive glands, working with dogs. He received the Nobel Prize in Physiology or Medicine in 1904 for his work on the physiology of digestion.
Even late in the 20th century there were surprises. In 1982, the Nobel committee later wrote, stress and lifestyle were considered the major causes of peptic ulcers. The pathologist Robin Warren in Perth, Australia, had noticed small curved bacteria in the lower part of the stomach in about half of the patients whose biopsies he examined, always close to signs of inflammation. With the young doctor Barry Marshall he studied biopsies from 100 patients; Marshall managed to grow the unknown bacterium, later named Helicobacter pylori, and the two showed that it was present in almost all patients with gastric inflammation or ulcers. The two received the 2005 Nobel Prize in Physiology or Medicine. Their story is a reminder that well-established ideas about the body can still change when someone looks closely.
- 1822: Alexis St. Martin is wounded; William Beaumont treats him.
- 1833: Beaumont publishes 238 experiments on gastric juice.
- 1904: Pavlov: Nobel Prize for the physiology of digestion.
- 1982: Marshall and Warren find Helicobacter pylori and link it to gastritis and ulcers.
- 2005: Marshall and Warren: Nobel Prize.
| Carbohydrates become | Simple sugars. |
| Proteins become | Amino acids. |
| Fats become | Fatty acids and glycerol. |
| Brush border enzymes | Finish carbohydrate and protein digestion on the microvilli. |
| Hepatic portal route | Sugars and amino acids go to the liver in the blood. |
| Lymph route | Fatty acids go into lacteals. |
- Proteins are broken down into...
- Amino acids
- Simple sugars
- Fatty acids
- Glycerol only
- Where does protein digestion begin?
- Stomach
- Mouth
- Large intestine
- Gallbladder
- Which route do fatty acids take after absorption?
- Into the lacteals and the lymph
- Straight into the stomach
- Into the gallbladder
- Out through the lungs
- The small intestine can absorb simple sugars at about 120 g per hour. How many grams in 15 minutes?
- On a day when 10 L passes through the tract and 1 L reaches the large intestine, what percentage was absorbed before the large intestine?
- Where do carbohydrate and protein digestion finish?
- At the brush border of the small intestine
- In the esophagus
- In the liver
- In the large intestine
- Pavlov's 1904 Nobel Prize was for work on...
- The physiology of digestion
- The structure of the eye
- Blood groups
- Vitamins
- Which bacterium did Marshall and Warren link to gastritis and peptic ulcers?
- Helicobacter pylori
- Escherichia coli
- Lactobacillus
- Streptococcus
- Put these events in time order.
- How many years separate Beaumont's book (1833) and Pavlov's Nobel Prize (1904)?
- Carbohydrates to simple sugars, proteins to amino acids, fats to fatty acids and glycerol.
- Starch starts in the mouth, protein in the stomach, most fat in the small intestine.
- Sugars and amino acids go to the liver in the blood; fats travel in the lymph.
- Beaumont (1833), Pavlov (Nobel 1904), Marshall and Warren (Nobel 2005).
This is educational material about how the body is built and works. It is not medical advice and is not for diagnosing or treating anyone.
Sources for this course (5)
- OpenStax Anatomy and Physiology 2e, 23.1 Overview of the Digestive System, 23.3 The Mouth, Pharynx, and Esophagus, 23.4 The Stomach, 23.5 The Small and Large Intestines, 23.6 Accessory Organs in Digestion: The Liver, Pancreas, and Gallbladder, 23.7 Chemical Digestion and Absorption: A Closer Look (openstax.org/books/anatomy-and-physiology-2e)
- NIH NIDDK "Your Digestive System & How It Works" (niddk.nih.gov/health-information/digestive-diseases/digestive-system-how-it-works)
- history: Britannica "William Beaumont", NCBI Bookshelf NBK459 (Beaumont, 1833 book, 238 experiments)
- PMC6172101 (Beaumont papers, 1822 fistula)
- NobelPrize.org 1904 (Pavlov, Nobel lecture page) and 2005 press release (Marshall and Warren, Helicobacter pylori)
Checked: 2026-10-17